Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Anxa13-202ENSMUST00000227274 1201 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm22865-201ENSMUST00000083949 214 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Rfx1P48377 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Rfx1P48377 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm15681-201ENSMUST00000137501 2704 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Rfx1P48377 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm8878-201ENSMUST00000173552 1725 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm8276-201ENSMUST00000192231 1812 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm12307-201ENSMUST00000120581 590 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm14623-201ENSMUST00000121398 603 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm13282-201ENSMUST00000121577 545 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm12754-201ENSMUST00000121908 454 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.69□□□□□ -1.02
Rfx1P48377 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm19807-201ENSMUST00000173971 667 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm21909-201ENSMUST00000178260 439 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm19200-201ENSMUST00000182579 1001 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm8524-201ENSMUST00000186232 379 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm28677-202ENSMUST00000186904 615 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm43212-201ENSMUST00000198208 394 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm9354-201ENSMUST00000209075 468 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC8.69□□□□□ -1.02
Rfx1P48377 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 AC117656.3-204ENSMUST00000225656 859 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Gm5436-201ENSMUST00000058103 643 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.69□□□□□ -1.02
Rfx1P48377 Mir484-201ENSMUST00000093566 67 ntBASIC8.69□□□□□ -1.02
Rfx1P48377 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Rfx1P48377 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.69□□□□□ -1.02
Rfx1P48377 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Rfx1P48377 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Klf5-202ENSMUST00000226784 2852 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm23701-201ENSMUST00000103893 110 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm22022-201ENSMUST00000104355 127 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm14576-201ENSMUST00000118073 1111 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms