Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.4□□□□□ -1.39
Sox6P40645 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox6P40645 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox6P40645 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Sox6P40645 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.4□□□□□ -1.39
Sox6P40645 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sox6P40645 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sox6P40645 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm26016-201ENSMUST00000104403 129 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm13878-201ENSMUST00000117986 577 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm15739-201ENSMUST00000118049 872 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm14251-201ENSMUST00000122133 279 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm22025-201ENSMUST00000122734 302 ntBASIC6.39□□□□□ -1.39
Sox6P40645 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox6P40645 Gm4613-201ENSMUST00000165488 276 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm5656-201ENSMUST00000171020 1096 ntBASIC6.39□□□□□ -1.39
Sox6P40645 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm18848-201ENSMUST00000182069 792 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm5261-201ENSMUST00000185860 713 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox6P40645 Gm28117-201ENSMUST00000188472 371 ntBASIC6.39□□□□□ -1.39
Sox6P40645 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm8921-201ENSMUST00000204306 649 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm29759-201ENSMUST00000205860 327 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC6.39□□□□□ -1.39
Sox6P40645 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 AC157212.1-201ENSMUST00000228398 1075 ntBASIC6.39□□□□□ -1.39
Sox6P40645 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.39□□□□□ -1.39
Sox6P40645 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox6P40645 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox6P40645 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox6P40645 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Sox6P40645 Mir678-201ENSMUST00000102114 84 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm25631-201ENSMUST00000104390 130 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm23657-201ENSMUST00000122623 294 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm24057-201ENSMUST00000158616 302 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm26528-201ENSMUST00000181965 283 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Mir8114-201ENSMUST00000183582 111 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm27684-201ENSMUST00000183778 80 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm18501-201ENSMUST00000185363 664 ntBASIC6.38□□□□□ -1.39
Sox6P40645 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm43664-201ENSMUST00000196038 734 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm43147-201ENSMUST00000196944 542 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm44943-201ENSMUST00000207254 300 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox6P40645 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Gm26130-201ENSMUST00000083171 138 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox6P40645 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox6P40645 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox6P40645 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.38□□□□□ -1.39
Sox6P40645 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox6P40645 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox6P40645 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox6P40645 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.37□□□□□ -1.39
Sox6P40645 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Sox6P40645 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms