Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm20302-201ENSMUST00000080671 275 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Cxcl12P40224 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Ano4-210ENSMUST00000182790 4018 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Pah-201ENSMUST00000020241 2142 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Cxcl12P40224 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm13983-201ENSMUST00000118018 865 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm7058-201ENSMUST00000119209 902 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm15781-201ENSMUST00000120216 323 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm14380-201ENSMUST00000122298 431 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm23030-201ENSMUST00000158004 273 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm17366-201ENSMUST00000167629 187 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm28266-201ENSMUST00000191410 439 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm37463-201ENSMUST00000193819 796 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm5324-201ENSMUST00000208115 476 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 AC159205.4-201ENSMUST00000225964 704 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 AC153955.4-201ENSMUST00000217069 2752 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Gm16123-201ENSMUST00000118647 1517 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 AC111010.1-203ENSMUST00000227287 1548 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Cxcl12P40224 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
Cxcl12P40224 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.1□□□□□ -1.27
Cxcl12P40224 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Cxcl12P40224 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC7.09□□□□□ -1.27
Cxcl12P40224 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm3810-201ENSMUST00000122413 476 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm24719-201ENSMUST00000157520 110 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm27512-201ENSMUST00000175328 126 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Mir3097-201ENSMUST00000175356 67 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm18700-201ENSMUST00000185791 553 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm43392-201ENSMUST00000196560 434 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 AV026068-216ENSMUST00000223874 328 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 AV026068-218ENSMUST00000223980 575 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm26163-201ENSMUST00000083792 178 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.09□□□□□ -1.27
Cxcl12P40224 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Cxcl12P40224 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Cxcl12P40224 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC7.09□□□□□ -1.28
Cxcl12P40224 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Cxcl12P40224 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Cxcl12P40224 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms