Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm24335-201ENSMUST00000104211 132 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm25273-201ENSMUST00000104295 115 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm14414-201ENSMUST00000120833 573 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC5.45□□□□□ -1.54
Sdc1P18828 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.45□□□□□ -1.54
Sdc1P18828 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm26977-201ENSMUST00000183151 996 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm20587-201ENSMUST00000186367 1186 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm3511-201ENSMUST00000199823 204 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm23927-202ENSMUST00000199928 216 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Sdc1P18828 AC130829.2-201ENSMUST00000222931 127 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 AC117949.1-201ENSMUST00000225547 419 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sdc1P18828 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm43225-201ENSMUST00000201381 1439 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm45088-201ENSMUST00000207066 1408 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm37953-201ENSMUST00000195293 1884 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm37891-201ENSMUST00000195585 1326 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm45633-201ENSMUST00000210669 3253 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm17184-201ENSMUST00000111864 462 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm11951-201ENSMUST00000116005 431 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Defa-ps7-201ENSMUST00000117139 168 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm12365-201ENSMUST00000117931 568 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm6491-201ENSMUST00000118273 990 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm15539-201ENSMUST00000118452 566 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm13858-201ENSMUST00000118862 671 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm13683-201ENSMUST00000119497 1076 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm26023-201ENSMUST00000122722 313 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm25722-201ENSMUST00000157498 279 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Sdc1P18828 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC5.44□□□□□ -1.54
Sdc1P18828 Gm4373-201ENSMUST00000178571 556 ntBASIC5.44□□□□□ -1.54
Sdc1P18828 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC5.44□□□□□ -1.54
Sdc1P18828 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Sdc1P18828 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms