Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Col1a1P11087 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.98□□□□□ -1.13
Col1a1P11087 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm24434-201ENSMUST00000104081 132 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Gm13430-201ENSMUST00000121366 288 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Gm7152-201ENSMUST00000163570 605 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm9274-201ENSMUST00000182505 984 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Mir7037-201ENSMUST00000184414 65 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm44361-201ENSMUST00000197960 94 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 BC049739-201ENSMUST00000202626 660 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Col1a1P11087 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.98□□□□□ -1.13
Col1a1P11087 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Col1a1P11087 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
Col1a1P11087 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm12262-201ENSMUST00000119915 305 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Gm31861-201ENSMUST00000204563 672 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Gm18838-201ENSMUST00000204855 886 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Gm18467-201ENSMUST00000208805 434 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Col1a1P11087 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Col1a1P11087 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.97□□□□□ -1.13
Col1a1P11087 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Col1a1P11087 Gm43679-201ENSMUST00000197051 3677 ntBASIC7.97□□□□□ -1.13
Col1a1P11087 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC7.96□□□□□ -1.13
Col1a1P11087 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Mir1960-201ENSMUST00000157488 78 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Gm24395-201ENSMUST00000158139 125 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.96□□□□□ -1.13
Col1a1P11087 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Mir7220-201ENSMUST00000183978 60 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.96□□□□□ -1.13
Col1a1P11087 Gm19195-201ENSMUST00000222018 511 ntBASIC7.96□□□□□ -1.13
Col1a1P11087 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Col1a1P11087 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Col1a1P11087 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.96□□□□□ -1.14
Col1a1P11087 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Col1a1P11087 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 4931406B18Rik-208ENSMUST00000191516 2566 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Col1a1P11087 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms