Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Sept2-214ENSMUST00000172165 3192 ntTSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm45025-201ENSMUST00000206043 2389 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.57□□□□□ -1.36
Hoxd3P09027 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Hoxd3P09027 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Hoxd3P09027 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm37315-201ENSMUST00000194347 3479 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Olfr1350-202ENSMUST00000207221 1521 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm5182-201ENSMUST00000217708 6092 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Tbc1d8b-201ENSMUST00000096313 5094 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Ano4-208ENSMUST00000182613 3880 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Cwc25-201ENSMUST00000018685 3105 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm23192-201ENSMUST00000102434 96 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm5287-201ENSMUST00000120666 598 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm6591-201ENSMUST00000121063 434 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm13495-201ENSMUST00000121156 537 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm14638-201ENSMUST00000121338 216 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm15242-201ENSMUST00000122459 283 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 D630024D03Rik-203ENSMUST00000134944 715 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm8121-201ENSMUST00000153583 499 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm27651-201ENSMUST00000183465 246 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm29068-201ENSMUST00000191607 400 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm8010-201ENSMUST00000194128 873 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm38328-201ENSMUST00000195582 317 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm43806-201ENSMUST00000201766 469 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm33115-202ENSMUST00000223487 703 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm22364-201ENSMUST00000083097 98 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm26132-201ENSMUST00000083166 148 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm24254-201ENSMUST00000083702 104 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm4149-201ENSMUST00000099371 276 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Hoxd3P09027 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.56□□□□□ -1.36
Hoxd3P09027 Slc29a3-202ENSMUST00000119595 3123 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Hoxd3P09027 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Hoxd3P09027 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms