Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CopeO89079 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
CopeO89079 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CopeO89079 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.88□□□□□ -1.31
CopeO89079 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CopeO89079 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CopeO89079 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CopeO89079 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CopeO89079 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CopeO89079 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.87□□□□□ -1.31
CopeO89079 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.87□□□□□ -1.31
CopeO89079 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.87□□□□□ -1.31
CopeO89079 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm12242-201ENSMUST00000118824 738 ntBASIC6.87□□□□□ -1.31
CopeO89079 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
CopeO89079 Gm8215-201ENSMUST00000120627 990 ntBASIC6.87□□□□□ -1.31
CopeO89079 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm14613-201ENSMUST00000122239 752 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm26023-201ENSMUST00000122722 313 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm7420-201ENSMUST00000162836 842 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm17047-201ENSMUST00000167709 430 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm25574-201ENSMUST00000175245 249 ntBASIC6.87□□□□□ -1.31
CopeO89079 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Pea15b-201ENSMUST00000182806 387 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm27684-201ENSMUST00000183778 80 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm29369-201ENSMUST00000190674 615 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.87□□□□□ -1.31
CopeO89079 Gm43013-201ENSMUST00000198216 247 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm17918-201ENSMUST00000205315 574 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm45196-201ENSMUST00000206751 825 ntBASIC6.87□□□□□ -1.31
CopeO89079 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.87□□□□□ -1.31
CopeO89079 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.87□□□□□ -1.31
CopeO89079 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.87□□□□□ -1.31
CopeO89079 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm25587-201ENSMUST00000082498 166 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm24451-201ENSMUST00000083353 133 ntBASIC6.87□□□□□ -1.31
CopeO89079 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.87□□□□□ -1.31
CopeO89079 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.87□□□□□ -1.31
CopeO89079 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CopeO89079 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CopeO89079 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.86□□□□□ -1.31
CopeO89079 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.86□□□□□ -1.31
CopeO89079 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.86□□□□□ -1.31
CopeO89079 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.86□□□□□ -1.31
CopeO89079 Gm25724-201ENSMUST00000104531 117 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm12447-201ENSMUST00000119110 470 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm6877-201ENSMUST00000119347 1101 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CopeO89079 Gm16284-201ENSMUST00000140995 400 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CopeO89079 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.86□□□□□ -1.31
CopeO89079 Gm26183-201ENSMUST00000157685 139 ntBASIC6.86□□□□□ -1.31
CopeO89079 Mir1929-201ENSMUST00000158635 93 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.86□□□□□ -1.31
CopeO89079 Mir1231-201ENSMUST00000175639 81 ntBASIC6.86□□□□□ -1.31
CopeO89079 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
CopeO89079 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.86□□□□□ -1.31
CopeO89079 Gm28573-201ENSMUST00000187821 380 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm6472-202ENSMUST00000187973 582 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm28145-201ENSMUST00000189742 380 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm28400-201ENSMUST00000191332 380 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm38373-201ENSMUST00000192042 288 ntBASIC6.86□□□□□ -1.31
CopeO89079 Gm30708-201ENSMUST00000202183 312 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms