Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm44704-201ENSMUST00000208963 1990 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 AC151904.3-201ENSMUST00000219266 895 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm14373-201ENSMUST00000122467 2158 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm3555-201ENSMUST00000160287 1395 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm14805-201ENSMUST00000120172 340 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm26037-201ENSMUST00000158150 311 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Gm9027-201ENSMUST00000165914 661 ntBASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc180J3QNE4 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm44652-201ENSMUST00000208648 2854 ntBASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm37864-201ENSMUST00000195308 3075 ntBASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm15332-201ENSMUST00000118386 357 ntBASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm5319-201ENSMUST00000118965 873 ntBASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc180J3QNE4 AC163660.4-201ENSMUST00000224983 2171 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm7113-201ENSMUST00000120477 958 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm15006-201ENSMUST00000121419 1122 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm20620-201ENSMUST00000177528 168 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Mir6973b-201ENSMUST00000184185 80 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm27653-201ENSMUST00000185037 136 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 AC102139.1-201ENSMUST00000227000 251 ntBASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc180J3QNE4 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc180J3QNE4 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc180J3QNE4 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc180J3QNE4 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Snora35-201ENSMUST00000104579 128 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm6181-201ENSMUST00000117187 264 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm23896-201ENSMUST00000158109 130 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm28885-201ENSMUST00000185615 563 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm3351-201ENSMUST00000193454 505 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm43116-201ENSMUST00000199789 195 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm44809-201ENSMUST00000208305 993 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Gm33312-201ENSMUST00000222443 332 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 AC137902.1-201ENSMUST00000228184 102 ntBASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc180J3QNE4 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms