Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm37716-201ENSMUST00000193553 947 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm42720-201ENSMUST00000196813 300 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm42581-201ENSMUST00000201774 966 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC134860.4-201ENSMUST00000223592 978 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC164297.5-201ENSMUST00000224365 198 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Cthrc1-204ENSMUST00000226433 596 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdh1F7BJK1 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Pcdh1F7BJK1 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.65□□□□□ -1.35
Pcdh1F7BJK1 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.65□□□□□ -1.35
Pcdh1F7BJK1 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdh1F7BJK1 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm9432-201ENSMUST00000117810 759 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm16056-201ENSMUST00000119293 135 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm9435-201ENSMUST00000120379 877 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm24532-201ENSMUST00000157951 286 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm25265-201ENSMUST00000158520 347 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm9890-201ENSMUST00000171867 537 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm22408-201ENSMUST00000174925 65 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm20617-201ENSMUST00000177082 717 ntTSL 3 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm24307-201ENSMUST00000178512 101 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Mir6340-201ENSMUST00000183857 119 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm17965-201ENSMUST00000193904 517 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm37481-201ENSMUST00000195176 403 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm43036-201ENSMUST00000200594 373 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm9689-201ENSMUST00000210009 428 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm18585-201ENSMUST00000215197 556 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 CT025526.1-201ENSMUST00000217327 267 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC164116.2-201ENSMUST00000225398 1038 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC124715.2-201ENSMUST00000226762 617 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Defb3-201ENSMUST00000033852 275 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.64□□□□□ -1.35
Pcdh1F7BJK1 AC169038.1-201ENSMUST00000227378 1352 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms