Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm42972-201ENSMUST00000196937 5617 ntBASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm43681-201ENSMUST00000201581 1903 ntBASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Col4a6B1AVK5 Gm8424-201ENSMUST00000117716 988 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm15616-201ENSMUST00000118662 375 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm12262-201ENSMUST00000119915 305 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm25244-201ENSMUST00000178089 132 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm18849-201ENSMUST00000189861 560 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm17824-201ENSMUST00000197690 805 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm44982-201ENSMUST00000208795 471 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm18467-201ENSMUST00000208805 434 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm3266-201ENSMUST00000217832 591 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm6056-201ENSMUST00000221253 488 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Olfr467-201ENSMUST00000084756 927 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col4a6B1AVK5 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm26289-201ENSMUST00000104169 131 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm14038-201ENSMUST00000121500 807 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm12618-201ENSMUST00000121754 483 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm23259-201ENSMUST00000158318 303 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Mir3090-201ENSMUST00000175597 87 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm3841-201ENSMUST00000191399 451 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm37463-201ENSMUST00000193819 796 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm43235-201ENSMUST00000200121 297 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm44111-201ENSMUST00000204649 399 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm18592-201ENSMUST00000221529 276 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Gm8256-203ENSMUST00000228692 591 ntBASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col4a6B1AVK5 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.95□□□□□ -1.3
Col4a6B1AVK5 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms