Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm8190-201ENSMUST00000199603 586 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 AC119894.1-201ENSMUST00000220399 350 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 AW822073-201ENSMUST00000075305 555 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm42771-201ENSMUST00000198342 2486 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm36527-201ENSMUST00000195500 3029 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm44950-201ENSMUST00000206403 2296 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Prdm10-201ENSMUST00000074510 3408 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm10513-201ENSMUST00000194203 6468 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm13114-201ENSMUST00000117605 106 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm12242-201ENSMUST00000118824 738 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm12710-201ENSMUST00000119011 216 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm22655-201ENSMUST00000174949 96 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm7426-201ENSMUST00000179046 404 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Mir7008-201ENSMUST00000184398 63 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm43392-201ENSMUST00000196560 434 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm26067-201ENSMUST00000103789 110 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Snora35-201ENSMUST00000104579 128 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm23030-201ENSMUST00000158004 273 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm5456-201ENSMUST00000170706 844 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm17045-201ENSMUST00000178600 844 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm28958-201ENSMUST00000185864 703 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm28455-201ENSMUST00000189105 1290 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm44360-201ENSMUST00000200081 82 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm31861-201ENSMUST00000204563 672 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Snora21-201ENSMUST00000082967 137 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Gm44165-201ENSMUST00000203093 1469 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC5.76□□□□□ -1.49
Col6a4A2AX52 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Col6a4A2AX52 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms