Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm23639-201ENSMUST00000175078 132 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm6472-202ENSMUST00000187973 582 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm21577-201ENSMUST00000190823 697 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm4785-201ENSMUST00000191025 751 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm43160-201ENSMUST00000196453 421 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm24826-202ENSMUST00000197298 216 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm43040-201ENSMUST00000202399 558 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm44213-201ENSMUST00000204977 703 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm6667-201ENSMUST00000217169 564 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm7731-201ENSMUST00000091759 470 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Lima1Q9ERG0 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm14201-201ENSMUST00000117627 289 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm8624-201ENSMUST00000118083 432 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm11926-201ENSMUST00000118520 430 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm11318-201ENSMUST00000118640 961 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm14631-201ENSMUST00000119067 594 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm24228-201ENSMUST00000158829 129 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm5314-201ENSMUST00000204852 466 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Lima1Q9ERG0 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Lima1Q9ERG0 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms