Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Mir706-201ENSMUST00000102262 84 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm25167-201ENSMUST00000104188 120 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm7091-201ENSMUST00000116438 586 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm12656-201ENSMUST00000118149 577 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm15913-201ENSMUST00000118492 331 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm11928-201ENSMUST00000119323 437 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm8430-201ENSMUST00000119780 471 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm11510-201ENSMUST00000120278 347 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm7350-201ENSMUST00000120964 636 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm12477-201ENSMUST00000121221 571 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm15187-201ENSMUST00000122329 264 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm22687-201ENSMUST00000158301 105 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm22698-201ENSMUST00000175375 108 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm9167-201ENSMUST00000182469 962 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm5147-201ENSMUST00000185999 794 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm8524-201ENSMUST00000186232 379 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm28728-201ENSMUST00000189087 405 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm36966-201ENSMUST00000192217 413 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm44192-201ENSMUST00000204195 556 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm44448-201ENSMUST00000205104 393 ntTSL 5 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm9240-201ENSMUST00000206527 742 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm18378-201ENSMUST00000216245 628 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Trim8Q99PJ2 Gm28359-201ENSMUST00000187470 1322 ntBASIC7.01□□□□□ -1.29
Trim8Q99PJ2 AC139758.3-201ENSMUST00000226853 2704 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Trim8Q99PJ2 AC139754.2-201ENSMUST00000218037 1455 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Mir763-201ENSMUST00000103249 120 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm24373-201ENSMUST00000104393 132 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 n-R5s72-201ENSMUST00000104518 119 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm6620-201ENSMUST00000120113 715 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm22670-201ENSMUST00000158724 143 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm18709-201ENSMUST00000180564 489 ntBASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC7□□□□□ -1.29
Trim8Q99PJ2 Gm20111-201ENSMUST00000184830 319 ntBASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms