Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm8812-201ENSMUST00000118496 412 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm14727-201ENSMUST00000118526 525 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm13900-201ENSMUST00000119402 498 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm9439-201ENSMUST00000119554 973 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm14721-201ENSMUST00000121381 525 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm22275-201ENSMUST00000122470 310 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm25640-201ENSMUST00000175378 125 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm19815-201ENSMUST00000175818 335 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm8357-201ENSMUST00000181115 1011 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Mir8120-201ENSMUST00000185035 139 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm7412-201ENSMUST00000191692 605 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm38022-201ENSMUST00000191762 403 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm37328-201ENSMUST00000193191 640 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm8182-201ENSMUST00000197863 769 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm7368-201ENSMUST00000213307 367 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 AC152169.2-201ENSMUST00000224558 613 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 CT573019.1-201ENSMUST00000227762 1689 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm22671-201ENSMUST00000104420 134 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm15203-201ENSMUST00000117668 455 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm13702-201ENSMUST00000118542 825 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm15096-201ENSMUST00000121918 878 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm23276-201ENSMUST00000157913 138 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm23116-201ENSMUST00000158481 67 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Mir1930-201ENSMUST00000158799 84 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm7426-201ENSMUST00000179046 404 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm23945-201ENSMUST00000179609 92 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm26528-201ENSMUST00000181965 283 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Trbv9-201ENSMUST00000194494 290 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm44690-201ENSMUST00000207984 382 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm34424-201ENSMUST00000213400 782 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm36758-201ENSMUST00000222594 310 ntBASIC6.73□□□□□ -1.33
Msh4Q99MT2 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms