Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Mir466f-3-201ENSMUST00000104788 94 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm17170-201ENSMUST00000112785 316 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm12306-201ENSMUST00000117256 171 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm12577-201ENSMUST00000119701 574 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm12331-201ENSMUST00000119927 622 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm22024-201ENSMUST00000122733 287 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm26069-201ENSMUST00000157497 277 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm15795-201ENSMUST00000160969 553 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm17047-201ENSMUST00000167709 430 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Mir7011-201ENSMUST00000183768 73 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Mir6374-201ENSMUST00000184003 107 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm29356-201ENSMUST00000186935 373 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm26967-201ENSMUST00000182878 2303 ntBASIC6.76□□□□□ -1.33
Clrn1Q8K445 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Clrn1Q8K445 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 AC164437.5-201ENSMUST00000227235 4414 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm43970-201ENSMUST00000204346 3605 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm28906-201ENSMUST00000191371 1779 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Clrn1Q8K445 Mir669o-201ENSMUST00000103898 96 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Gm24284-201ENSMUST00000104240 142 ntBASIC6.75□□□□□ -1.33
Clrn1Q8K445 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms