Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm15765-201ENSMUST00000118407 910 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm4342-201ENSMUST00000118982 367 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm13333-201ENSMUST00000119424 781 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm12890-201ENSMUST00000120885 373 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm15171-201ENSMUST00000122191 334 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm25387-201ENSMUST00000157813 132 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm23896-201ENSMUST00000158109 130 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm22530-201ENSMUST00000158820 118 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm5456-201ENSMUST00000170706 844 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm17045-201ENSMUST00000178600 844 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm2040-201ENSMUST00000202979 289 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm44902-201ENSMUST00000206177 805 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 AC172027.1-201ENSMUST00000217659 337 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.85□□□□□ -1.15
Syne4Q8CII8 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Syne4Q8CII8 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm17841-201ENSMUST00000210711 2425 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm25843-201ENSMUST00000122582 314 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm21990-201ENSMUST00000124692 383 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm25550-201ENSMUST00000158079 128 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.84□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms