Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm8192-201ENSMUST00000182196 958 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm26959-201ENSMUST00000182376 978 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm8826-201ENSMUST00000193161 948 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm2505-201ENSMUST00000200413 825 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm4605-201ENSMUST00000203148 625 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm43905-201ENSMUST00000204516 204 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm44232-201ENSMUST00000204537 225 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm4796-201ENSMUST00000219802 624 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 AC154851.2-201ENSMUST00000222172 644 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 AC159188.3-201ENSMUST00000224199 880 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 n-R5s97-201ENSMUST00000082585 113 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm10601-201ENSMUST00000120436 1422 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.43□□□□□ -1.22
Ccdc87Q8CDL9 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm11880-201ENSMUST00000117612 399 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm13878-201ENSMUST00000117986 577 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm11865-201ENSMUST00000118093 859 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm14300-201ENSMUST00000120800 946 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm13940-201ENSMUST00000121023 301 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm2735-201ENSMUST00000136133 277 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Mir1981-201ENSMUST00000157934 82 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm23639-201ENSMUST00000175078 132 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm8305-201ENSMUST00000180022 1195 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm29496-201ENSMUST00000189854 693 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm18865-201ENSMUST00000193011 1171 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ccdc87Q8CDL9 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms