Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm42611-201ENSMUST00000199446 3407 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm42577-201ENSMUST00000201367 3211 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm22707-201ENSMUST00000103834 110 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm6987-201ENSMUST00000119319 428 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm14363-201ENSMUST00000122304 409 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm29464-201ENSMUST00000187692 513 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm43546-201ENSMUST00000196721 943 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm43772-201ENSMUST00000202052 379 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm42713-201ENSMUST00000202709 945 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm38840-201ENSMUST00000204716 843 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm45136-201ENSMUST00000205793 943 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm18907-201ENSMUST00000209719 932 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 AV026068-219ENSMUST00000224148 933 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm24036-201ENSMUST00000082868 156 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm16020-201ENSMUST00000084281 210 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm42994-201ENSMUST00000195964 2549 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.09□□□□□ -1.11
Vps53Q8CCB4 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Vps53Q8CCB4 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Vps53Q8CCB4 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm43953-201ENSMUST00000203709 2867 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm8812-201ENSMUST00000118496 412 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm12504-202ENSMUST00000148026 306 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm23740-201ENSMUST00000157385 100 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm16298-201ENSMUST00000161107 420 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm27156-201ENSMUST00000184589 754 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm18752-201ENSMUST00000192876 608 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm37328-201ENSMUST00000193191 640 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm45610-201ENSMUST00000209227 784 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm2840-201ENSMUST00000048361 411 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.08□□□□□ -1.12
Vps53Q8CCB4 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms