Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm14038-201ENSMUST00000121500 807 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm5456-201ENSMUST00000170706 844 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm17045-201ENSMUST00000178600 844 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm36965-201ENSMUST00000193797 394 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm46311-201ENSMUST00000217971 203 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm6887-201ENSMUST00000080945 482 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm45290-201ENSMUST00000211177 3890 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm6011-201ENSMUST00000211736 1796 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm12229-201ENSMUST00000120487 468 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Mir5617-201ENSMUST00000176786 57 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Mir6348-201ENSMUST00000183804 120 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm28846-201ENSMUST00000189161 368 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm42752-201ENSMUST00000198394 1106 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm17918-201ENSMUST00000205315 574 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm10764-202ENSMUST00000220397 2335 ntBASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Atg4aQ8C9S8 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm37595-201ENSMUST00000192668 1742 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm15007-201ENSMUST00000119982 710 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm26023-201ENSMUST00000122722 313 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm7289-201ENSMUST00000168993 734 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Mir6908-201ENSMUST00000184056 63 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Mir6987-201ENSMUST00000184789 73 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm27782-201ENSMUST00000185059 199 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm36991-201ENSMUST00000191800 648 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm36932-201ENSMUST00000195226 929 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm44252-201ENSMUST00000204187 330 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm44213-201ENSMUST00000204977 703 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm44911-201ENSMUST00000208436 1062 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm19007-201ENSMUST00000217746 874 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm24621-201ENSMUST00000082679 140 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.18□□□□□ -1.1
Atg4aQ8C9S8 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms