Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.65□□□□□ -1.03
Trim47Q8C0E3 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm14007-201ENSMUST00000118288 210 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm6427-201ENSMUST00000118721 979 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm6373-201ENSMUST00000121026 360 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm24065-201ENSMUST00000157487 264 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm24530-201ENSMUST00000157948 288 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Atp2b4-208ENSMUST00000167348 243 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm15251-201ENSMUST00000177947 883 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm27317-201ENSMUST00000183533 95 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm7654-201ENSMUST00000186738 683 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm36965-201ENSMUST00000193797 394 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm8925-201ENSMUST00000197212 763 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm42983-201ENSMUST00000199879 815 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm4259-201ENSMUST00000206489 758 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm44561-201ENSMUST00000208869 264 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 AC153541.1-201ENSMUST00000213786 294 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 AC116726.2-201ENSMUST00000217629 986 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Mif-ps7-201ENSMUST00000223357 327 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.64□□□□□ -1.03
Trim47Q8C0E3 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim47Q8C0E3 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm18066-201ENSMUST00000210904 1774 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm43515-201ENSMUST00000197930 2141 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm8107-201ENSMUST00000117477 2009 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Ssh2-201ENSMUST00000037912 9178 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm6654-201ENSMUST00000118950 348 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm13532-201ENSMUST00000120373 240 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm11606-201ENSMUST00000120706 617 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm12642-201ENSMUST00000121098 876 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm26182-201ENSMUST00000157688 116 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms