Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm43637-201ENSMUST00000202206 2926 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm13265-201ENSMUST00000118090 421 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm15194-201ENSMUST00000120453 434 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm18752-201ENSMUST00000192876 608 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm37475-201ENSMUST00000193107 1015 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm37463-201ENSMUST00000193819 796 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm5853-201ENSMUST00000197183 632 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm7731-201ENSMUST00000091759 470 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC9.59□□□□□ -0.87
Usp54Q8BL06 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Usp54Q8BL06 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm24395-201ENSMUST00000158139 125 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm15257-201ENSMUST00000177680 883 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm15252-201ENSMUST00000177750 883 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm15256-201ENSMUST00000177793 883 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm15260-201ENSMUST00000179402 883 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm9517-201ENSMUST00000195021 874 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm18112-201ENSMUST00000219862 1195 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 AC154563.1-201ENSMUST00000228317 442 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Olfr467-201ENSMUST00000084756 927 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm21846-201ENSMUST00000179257 3073 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm6494-201ENSMUST00000218604 2298 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm22552-201ENSMUST00000157796 337 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm25374-201ENSMUST00000158158 101 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm38122-201ENSMUST00000192679 885 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm37187-201ENSMUST00000193425 341 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm18592-201ENSMUST00000221529 276 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 Gm8256-203ENSMUST00000228692 591 ntBASIC9.58□□□□□ -0.88
Usp54Q8BL06 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Usp54Q8BL06 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm43176-201ENSMUST00000199653 2989 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Slco6b1-202ENSMUST00000178359 1778 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm44652-201ENSMUST00000208648 2854 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm7058-201ENSMUST00000119209 902 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm6004-201ENSMUST00000173237 1116 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm9529-201ENSMUST00000177598 579 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Mir3473e-201ENSMUST00000183932 110 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm7343-201ENSMUST00000194510 1061 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm44265-201ENSMUST00000203631 465 ntBASIC9.57□□□□□ -0.88
Usp54Q8BL06 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Usp54Q8BL06 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 127.4 ms