Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm25437-201ENSMUST00000158282 132 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm21772-201ENSMUST00000169213 478 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm17126-201ENSMUST00000172276 523 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm27018-201ENSMUST00000181136 225 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm27458-201ENSMUST00000185108 121 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm37241-201ENSMUST00000191736 523 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm37689-201ENSMUST00000193139 275 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm37322-201ENSMUST00000193409 337 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.97□□□□□ -1.13
Hmgb1P63158 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Olfr480-201ENSMUST00000071658 1029 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm24613-201ENSMUST00000083266 130 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Hmgb1P63158 CT573019.1-201ENSMUST00000227762 1689 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb1P63158 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.97□□□□□ -1.13
Hmgb1P63158 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.97□□□□□ -1.13
Hmgb1P63158 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.96□□□□□ -1.13
Hmgb1P63158 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb1P63158 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.96□□□□□ -1.13
Hmgb1P63158 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm14645-201ENSMUST00000118597 417 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm11850-201ENSMUST00000119679 479 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm12642-201ENSMUST00000121098 876 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm22275-201ENSMUST00000122470 310 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm7678-201ENSMUST00000181879 943 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm27266-201ENSMUST00000184521 123 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm37225-201ENSMUST00000193423 325 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm37349-201ENSMUST00000194205 624 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm44982-201ENSMUST00000208795 471 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm2961-201ENSMUST00000211074 772 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 AC163621.2-201ENSMUST00000222229 682 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 AC164618.1-201ENSMUST00000225769 592 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm43490-201ENSMUST00000197593 2652 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.96□□□□□ -1.14
Hmgb1P63158 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb1P63158 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb1P63158 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb1P63158 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb1P63158 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms