Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm7019-201ENSMUST00000194122 369 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Gm10416-201ENSMUST00000197379 645 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Gm4860-201ENSMUST00000200368 454 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Gm44279-201ENSMUST00000205154 472 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Gm7252-201ENSMUST00000223284 456 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lhx1P63006 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm24621-201ENSMUST00000082679 140 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lhx1P63006 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.76□□□□□ -1.33
Lhx1P63006 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lhx1P63006 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm25760-201ENSMUST00000103989 132 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm16073-201ENSMUST00000116032 517 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm13768-201ENSMUST00000116469 929 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm12778-201ENSMUST00000122341 333 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm25722-201ENSMUST00000157498 279 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm24176-201ENSMUST00000158928 121 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm6264-201ENSMUST00000160802 624 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm2619-202ENSMUST00000166777 651 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm35323-201ENSMUST00000191836 499 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm7463-201ENSMUST00000201541 547 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm17849-201ENSMUST00000219788 853 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gpr87-201ENSMUST00000056898 1080 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Lhx1P63006 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm26130-201ENSMUST00000083171 138 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm7731-201ENSMUST00000091759 470 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Lhx1P63006 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lhx1P63006 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lhx1P63006 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.75□□□□□ -1.33
Lhx1P63006 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.74□□□□□ -1.33
Lhx1P63006 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lhx1P63006 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lhx1P63006 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lhx1P63006 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms