Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm18995-201ENSMUST00000202981 520 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm8686-201ENSMUST00000203028 388 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 AC160962.2-201ENSMUST00000224761 632 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 AC107663.2-201ENSMUST00000225534 1234 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 AC107452.2-201ENSMUST00000228415 363 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm6083-201ENSMUST00000075518 357 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm16072-201ENSMUST00000119574 2377 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.74□□□□□ -1.33
Sf3b6P59708 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sf3b6P59708 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sf3b6P59708 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 AC122878.1-201ENSMUST00000227716 1460 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm5228-201ENSMUST00000117186 357 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm11207-201ENSMUST00000117824 414 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm12851-201ENSMUST00000117920 421 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm14584-201ENSMUST00000118956 637 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm11746-201ENSMUST00000119843 821 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm15989-201ENSMUST00000121895 498 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm11895-201ENSMUST00000122165 467 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm15077-201ENSMUST00000122344 362 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm6689-201ENSMUST00000130905 481 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm23164-201ENSMUST00000175084 111 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm24417-201ENSMUST00000178123 79 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm24653-201ENSMUST00000178541 79 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm25934-201ENSMUST00000178642 79 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm7634-201ENSMUST00000185778 553 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm3142-201ENSMUST00000190107 414 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm37809-201ENSMUST00000195050 931 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm43655-201ENSMUST00000197367 222 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm19764-201ENSMUST00000203630 649 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC6.73□□□□□ -1.33
Sf3b6P59708 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm45432-201ENSMUST00000210391 416 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 Gm45734-201ENSMUST00000211916 411 ntBASIC6.73□□□□□ -1.33
Sf3b6P59708 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC6.73□□□□□ -1.33
Sf3b6P59708 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms