Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm23094-201ENSMUST00000157551 322 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm22262-201ENSMUST00000158713 86 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm8164-201ENSMUST00000169120 1192 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm19840-201ENSMUST00000169624 882 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm26729-201ENSMUST00000180744 352 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm38231-201ENSMUST00000192030 347 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm8869-201ENSMUST00000195222 947 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm42509-201ENSMUST00000197390 781 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.71□□□□□ -1.02
Rfx1P48377 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC8.71□□□□□ -1.02
Rfx1P48377 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm18892-201ENSMUST00000217628 881 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.71□□□□□ -1.02
Rfx1P48377 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm6369-201ENSMUST00000069626 412 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Rfx1P48377 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Rfx1P48377 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Rfx1P48377 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Gm4927-201ENSMUST00000219548 1318 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.71□□□□□ -1.02
Rfx1P48377 AC166341.5-201ENSMUST00000222206 1400 ntBASIC8.71□□□□□ -1.02
Rfx1P48377 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rfx1P48377 Gm6823-201ENSMUST00000120791 1839 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm26469-201ENSMUST00000116765 121 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm13359-201ENSMUST00000119000 695 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm15754-201ENSMUST00000119191 478 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm14202-201ENSMUST00000120121 311 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm15062-201ENSMUST00000120567 367 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm14463-201ENSMUST00000121117 498 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm23259-201ENSMUST00000158318 303 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm25265-201ENSMUST00000158520 347 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm27972-201ENSMUST00000184720 137 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm29357-201ENSMUST00000186877 698 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm28142-201ENSMUST00000186899 698 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm5268-201ENSMUST00000189212 940 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm9931-201ENSMUST00000193584 1185 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm44306-201ENSMUST00000203058 203 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm4259-201ENSMUST00000206489 758 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm44681-201ENSMUST00000208447 842 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm2225-201ENSMUST00000209570 377 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm6909-201ENSMUST00000209825 989 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC8.7□□□□□ -1.02
Rfx1P48377 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Rfx1P48377 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.7□□□□□ -1.02
Rfx1P48377 AL591207.2-201ENSMUST00000222991 337 ntBASIC8.7□□□□□ -1.02
Rfx1P48377 AC164597.2-201ENSMUST00000226738 603 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms