Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm3266-201ENSMUST00000217832 591 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 AC138765.3-201ENSMUST00000227981 423 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm42572-201ENSMUST00000202292 3378 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Ptk2b-208ENSMUST00000178730 3863 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm37956-201ENSMUST00000195208 2010 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm24434-201ENSMUST00000104081 132 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm15209-201ENSMUST00000117703 400 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm29519-201ENSMUST00000186994 398 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm18467-201ENSMUST00000208805 434 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm18469-201ENSMUST00000208850 439 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm45448-201ENSMUST00000211739 209 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm35619-201ENSMUST00000222548 600 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm25587-201ENSMUST00000082498 166 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Zfp850-201ENSMUST00000099111 941 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Cxcl12P40224 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.12□□□□□ -1.27
Cxcl12P40224 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Cxcl12P40224 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Cxcl12P40224 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Tacc2-202ENSMUST00000059145 3906 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm9839-201ENSMUST00000195252 1437 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm22426-201ENSMUST00000103811 96 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm12262-201ENSMUST00000119915 305 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm16511-201ENSMUST00000120019 564 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm12630-201ENSMUST00000121575 784 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm37349-201ENSMUST00000194205 624 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.11□□□□□ -1.27
Cxcl12P40224 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.11□□□□□ -1.27
Cxcl12P40224 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Cxcl12P40224 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms