Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Pde6bP23440 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Gm42490-201ENSMUST00000198595 2064 ntBASIC8.18□□□□□ -1.1
Pde6bP23440 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.18□□□□□ -1.1
Pde6bP23440 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Pde6bP23440 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14279-201ENSMUST00000117142 332 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm10243-201ENSMUST00000117571 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm11653-201ENSMUST00000119992 1009 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm13877-201ENSMUST00000120614 417 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14054-201ENSMUST00000120744 704 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm11474-201ENSMUST00000120814 277 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm6921-201ENSMUST00000161478 435 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm6434-201ENSMUST00000163316 372 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm42767-201ENSMUST00000198583 632 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm44243-201ENSMUST00000204323 692 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm45042-201ENSMUST00000207377 211 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm45925-202ENSMUST00000219904 1136 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 AC134860.4-201ENSMUST00000223592 978 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm5514-201ENSMUST00000060477 306 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm10123-201ENSMUST00000075723 490 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm25189-201ENSMUST00000083911 164 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Gm10247-201ENSMUST00000090395 333 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Pde6bP23440 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC8.17□□□□□ -1.1
Pde6bP23440 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Pde6bP23440 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.17□□□□□ -1.1
Pde6bP23440 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
Pde6bP23440 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.17□□□□□ -1.1
Pde6bP23440 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm22927-201ENSMUST00000104268 131 ntBASIC8.16□□□□□ -1.1
Pde6bP23440 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Pde6bP23440 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm13414-201ENSMUST00000117516 727 ntBASIC8.16□□□□□ -1.1
Pde6bP23440 Gm11880-201ENSMUST00000117612 399 ntBASIC8.16□□□□□ -1.1
Pde6bP23440 Gm14000-201ENSMUST00000118670 233 ntBASIC8.16□□□□□ -1.1
Pde6bP23440 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Pde6bP23440 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.16□□□□□ -1.1
Pde6bP23440 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Pde6bP23440 Gm24050-201ENSMUST00000158623 290 ntBASIC8.16□□□□□ -1.1
Pde6bP23440 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 474.6 ms