Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
P20040 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
P20040 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.06□□□□□ -1.44
P20040 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 Gm13400-201ENSMUST00000117436 380 ntBASIC6.06□□□□□ -1.44
P20040 Gm14727-201ENSMUST00000118526 525 ntBASIC6.06□□□□□ -1.44
P20040 Gm11257-201ENSMUST00000121313 315 ntBASIC6.06□□□□□ -1.44
P20040 Gm14721-201ENSMUST00000121381 525 ntBASIC6.06□□□□□ -1.44
P20040 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Gm26323-201ENSMUST00000157743 175 ntBASIC6.06□□□□□ -1.44
P20040 Gm23757-201ENSMUST00000158353 100 ntBASIC6.06□□□□□ -1.44
P20040 Gm16026-205ENSMUST00000162923 641 ntBASIC6.06□□□□□ -1.44
P20040 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Gm28665-201ENSMUST00000189269 670 ntBASIC6.06□□□□□ -1.44
P20040 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.06□□□□□ -1.44
P20040 Gm38022-201ENSMUST00000191762 403 ntBASIC6.06□□□□□ -1.44
P20040 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.06□□□□□ -1.44
P20040 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.06□□□□□ -1.44
P20040 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC6.06□□□□□ -1.44
P20040 Gm44147-201ENSMUST00000204658 94 ntBASIC6.06□□□□□ -1.44
P20040 Gm44112-201ENSMUST00000204787 372 ntBASIC6.06□□□□□ -1.44
P20040 2310001K20Rik-201ENSMUST00000206600 951 ntBASIC6.06□□□□□ -1.44
P20040 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 AV026068-219ENSMUST00000224148 933 ntBASIC6.06□□□□□ -1.44
P20040 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.06□□□□□ -1.44
P20040 Gm2840-201ENSMUST00000048361 411 ntBASIC6.06□□□□□ -1.44
P20040 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
P20040 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
P20040 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
P20040 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.06□□□□□ -1.44
P20040 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.06□□□□□ -1.44
P20040 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.06□□□□□ -1.44
P20040 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.06□□□□□ -1.44
P20040 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
P20040 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.05□□□□□ -1.44
P20040 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.05□□□□□ -1.44
P20040 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
P20040 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Mir678-201ENSMUST00000102114 84 ntBASIC6.05□□□□□ -1.44
P20040 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
P20040 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.05□□□□□ -1.44
P20040 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.05□□□□□ -1.44
P20040 Gm6743-201ENSMUST00000117345 1066 ntBASIC6.05□□□□□ -1.44
P20040 Gm15203-201ENSMUST00000117668 455 ntBASIC6.05□□□□□ -1.44
P20040 Gm5319-201ENSMUST00000118965 873 ntBASIC6.05□□□□□ -1.44
P20040 Gm14728-201ENSMUST00000122196 492 ntBASIC6.05□□□□□ -1.44
P20040 Gm23657-201ENSMUST00000122623 294 ntBASIC6.05□□□□□ -1.44
P20040 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC6.05□□□□□ -1.44
P20040 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.05□□□□□ -1.44
P20040 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
P20040 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC6.05□□□□□ -1.44
P20040 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
P20040 Gm2976-201ENSMUST00000160362 513 ntBASIC6.05□□□□□ -1.44
P20040 Gm6061-201ENSMUST00000175860 492 ntBASIC6.05□□□□□ -1.44
P20040 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.05□□□□□ -1.44
P20040 Gm26528-201ENSMUST00000181965 283 ntBASIC6.05□□□□□ -1.44
P20040 Gm8192-201ENSMUST00000182196 958 ntBASIC6.05□□□□□ -1.44
P20040 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.05□□□□□ -1.44
P20040 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Gm22711-202ENSMUST00000197029 135 ntBASIC6.05□□□□□ -1.44
P20040 Gm44943-201ENSMUST00000207254 300 ntBASIC6.05□□□□□ -1.44
P20040 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC6.05□□□□□ -1.44
P20040 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.05□□□□□ -1.44
P20040 Gm34424-201ENSMUST00000213400 782 ntBASIC6.05□□□□□ -1.44
P20040 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.05□□□□□ -1.44
P20040 Gm2398-201ENSMUST00000218347 883 ntBASIC6.05□□□□□ -1.44
P20040 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.05□□□□□ -1.44
P20040 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.05□□□□□ -1.44
P20040 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.05□□□□□ -1.44
P20040 AC122937.2-201ENSMUST00000228258 1051 ntBASIC6.05□□□□□ -1.44
P20040 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.05□□□□□ -1.44
P20040 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
P20040 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.05□□□□□ -1.44
P20040 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
P20040 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
P20040 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms