Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm3585-201ENSMUST00000173438 875 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Mir8099-2-201ENSMUST00000183568 127 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Mir8099-1-201ENSMUST00000184238 127 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm37493-201ENSMUST00000193167 433 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Gm37225-201ENSMUST00000193423 325 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Slamf6-204ENSMUST00000194561 984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm44243-201ENSMUST00000204323 692 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Gm4548-201ENSMUST00000208487 509 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC5.47□□□□□ -1.53
Sdc1P18828 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC5.47□□□□□ -1.53
Sdc1P18828 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 AV026068-219ENSMUST00000224148 933 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sdc1P18828 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 AC117608.1-201ENSMUST00000225500 3418 ntBASIC5.46□□□□□ -1.53
Sdc1P18828 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Sdc1P18828 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.46□□□□□ -1.53
Sdc1P18828 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sdc1P18828 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Sdc1P18828 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sdc1P18828 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
Sdc1P18828 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Sdc1P18828 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm11976-201ENSMUST00000119236 295 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm14485-201ENSMUST00000119489 493 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm14034-201ENSMUST00000120147 551 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm11257-201ENSMUST00000121313 315 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm12152-201ENSMUST00000122465 684 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm25320-201ENSMUST00000122551 324 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm22687-201ENSMUST00000158301 105 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm16112-201ENSMUST00000159075 382 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm16026-205ENSMUST00000162923 641 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Slc15a2-212ENSMUST00000168279 958 ntTSL 3 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm20694-201ENSMUST00000176943 404 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Mir6912-201ENSMUST00000184456 70 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm29160-201ENSMUST00000190094 699 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm38291-201ENSMUST00000193671 259 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm43805-201ENSMUST00000198488 824 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sdc1P18828 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Sdc1P18828 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.46□□□□□ -1.54
Sdc1P18828 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 AC137117.3-201ENSMUST00000226265 485 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm24143-201ENSMUST00000082633 145 ntBASIC5.46□□□□□ -1.54
Sdc1P18828 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Sdc1P18828 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.46□□□□□ -1.54
Sdc1P18828 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.45□□□□□ -1.54
Sdc1P18828 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Sdc1P18828 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms