Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
UbbP0CG49 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.9□□□□□ -1.46
UbbP0CG49 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm43339-201ENSMUST00000200032 1606 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm25614-201ENSMUST00000104013 133 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm13196-201ENSMUST00000118297 379 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm11295-201ENSMUST00000121379 803 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm5270-201ENSMUST00000121506 1002 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm18430-201ENSMUST00000197534 682 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm44984-201ENSMUST00000207802 394 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC5.9□□□□□ -1.46
UbbP0CG49 Gm8616-201ENSMUST00000222175 1037 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UbbP0CG49 Arhgef33-207ENSMUST00000224966 490 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm20900-201ENSMUST00000078729 472 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Gm6887-201ENSMUST00000080945 482 ntBASIC5.9□□□□□ -1.46
UbbP0CG49 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.9□□□□□ -1.47
UbbP0CG49 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.9□□□□□ -1.47
UbbP0CG49 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.9□□□□□ -1.47
UbbP0CG49 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UbbP0CG49 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.9□□□□□ -1.47
UbbP0CG49 Gm43880-201ENSMUST00000203635 2162 ntBASIC5.9□□□□□ -1.47
UbbP0CG49 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UbbP0CG49 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
UbbP0CG49 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
UbbP0CG49 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UbbP0CG49 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm37163-201ENSMUST00000195439 1690 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.89□□□□□ -1.47
UbbP0CG49 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm26146-201ENSMUST00000104478 185 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm12817-201ENSMUST00000119622 610 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm11371-201ENSMUST00000120294 385 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm27158-201ENSMUST00000183813 238 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC5.89□□□□□ -1.47
UbbP0CG49 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm21728-201ENSMUST00000188442 695 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm21889-201ENSMUST00000188487 695 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20932-201ENSMUST00000189115 694 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm21920-201ENSMUST00000190042 695 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm28341-201ENSMUST00000190883 472 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm42887-201ENSMUST00000202469 1119 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm42883-201ENSMUST00000202594 222 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.89□□□□□ -1.47
UbbP0CG49 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm35638-201ENSMUST00000220724 652 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 AC154487.1-201ENSMUST00000224649 226 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UbbP0CG49 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm24046-201ENSMUST00000083111 165 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UbbP0CG49 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
UbbP0CG49 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 AC122305.1-201ENSMUST00000214803 3921 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
UbbP0CG49 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.89□□□□□ -1.47
UbbP0CG49 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
UbbP0CG49 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms