Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm9114-201ENSMUST00000188558 997 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm42782-201ENSMUST00000197286 522 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 AC172989.1-201ENSMUST00000226387 513 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm43279-201ENSMUST00000202376 2512 ntBASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Chmp6P0C0A3 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm13739-201ENSMUST00000118020 530 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm14158-201ENSMUST00000118409 308 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm25281-201ENSMUST00000157270 104 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm22119-201ENSMUST00000175594 99 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Mir6987-201ENSMUST00000184789 73 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm18752-201ENSMUST00000192876 608 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm37871-201ENSMUST00000194973 688 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm6887-201ENSMUST00000080945 482 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm38026-201ENSMUST00000193284 3880 ntBASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Chmp6P0C0A3 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm14893-201ENSMUST00000117904 282 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm11858-201ENSMUST00000117935 838 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm13735-201ENSMUST00000120217 670 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm11689-201ENSMUST00000120766 302 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm11581-201ENSMUST00000122024 763 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm29048-201ENSMUST00000185342 615 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm29403-201ENSMUST00000185491 615 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm28234-201ENSMUST00000185657 615 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm28248-201ENSMUST00000186093 615 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm29633-202ENSMUST00000186217 615 ntBASIC7.4□□□□□ -1.22
Chmp6P0C0A3 Gm28829-201ENSMUST00000186231 615 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms