Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm43226-201ENSMUST00000202438 259 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm18860-201ENSMUST00000212029 764 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 AC153845.1-201ENSMUST00000213596 428 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 AC154461.4-201ENSMUST00000224878 468 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.5□□□□□ -1.53
Hmgb3O54879 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Hmgb3O54879 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Hmgb3O54879 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm43747-201ENSMUST00000201412 1330 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Mir697-201ENSMUST00000102316 109 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm12599-201ENSMUST00000120534 792 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm22311-201ENSMUST00000158006 110 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm5787-201ENSMUST00000183049 1038 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm7200-201ENSMUST00000188426 1163 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm18351-201ENSMUST00000188646 883 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm43656-201ENSMUST00000197882 434 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm21054-201ENSMUST00000203981 380 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm6581-201ENSMUST00000214545 260 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 AV026068-219ENSMUST00000224148 933 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 AC117949.1-201ENSMUST00000225547 419 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 AC133189.3-201ENSMUST00000226269 878 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Hmgb3O54879 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm37863-201ENSMUST00000194911 1457 ntBASIC5.49□□□□□ -1.53
Hmgb3O54879 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Hmgb3O54879 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Hmgb3O54879 Gm31049-201ENSMUST00000201516 1302 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Gm43872-201ENSMUST00000203218 2213 ntBASIC5.48□□□□□ -1.53
Hmgb3O54879 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Hmgb3O54879 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Hmgb3O54879 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms