Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
NpcdF8VQB8 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 AC122426.1-201ENSMUST00000214736 2235 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm2178-201ENSMUST00000104927 357 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm12584-201ENSMUST00000117109 1105 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm12244-201ENSMUST00000119500 291 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm15192-201ENSMUST00000121005 293 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm12833-201ENSMUST00000136112 477 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC8.83□□□□□ -1
NpcdF8VQB8 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm7867-201ENSMUST00000189856 546 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm9038-201ENSMUST00000203400 604 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm44865-201ENSMUST00000207240 531 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm45626-201ENSMUST00000210093 361 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Gm7688-201ENSMUST00000212857 337 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 AC135086.1-201ENSMUST00000228621 817 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC8.83□□□□□ -1
NpcdF8VQB8 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
NpcdF8VQB8 AC125409.2-201ENSMUST00000221888 2158 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.83□□□□□ -1
NpcdF8VQB8 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
NpcdF8VQB8 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.83□□□□□ -1
NpcdF8VQB8 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
NpcdF8VQB8 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm24709-201ENSMUST00000104123 132 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm14869-201ENSMUST00000119007 884 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm5166-201ENSMUST00000121332 573 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm23819-201ENSMUST00000158744 109 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm2539-203ENSMUST00000181352 746 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Mir6374-201ENSMUST00000184003 107 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm43104-201ENSMUST00000197234 311 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm9357-201ENSMUST00000207138 805 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Gm46424-201ENSMUST00000221567 168 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 AC156574.1-201ENSMUST00000227084 452 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 AC132833.3-201ENSMUST00000227472 866 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC8.82□□□□□ -1
NpcdF8VQB8 Gm15500-201ENSMUST00000071523 894 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 BC023105-201ENSMUST00000073997 1227 ntBASIC8.82□□□□□ -1
NpcdF8VQB8 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.82□□□□□ -1
NpcdF8VQB8 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms