Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm6428-201ENSMUST00000161062 345 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm8498-201ENSMUST00000188227 974 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm38213-201ENSMUST00000193203 173 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm7631-201ENSMUST00000196935 1100 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm43295-201ENSMUST00000201439 412 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm5723-201ENSMUST00000203096 432 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm44234-201ENSMUST00000204246 900 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm45283-201ENSMUST00000210593 628 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC109214.2-201ENSMUST00000220089 358 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC163638.1-201ENSMUST00000224818 392 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Nsa2-203ENSMUST00000225410 974 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC167192.1-201ENSMUST00000225908 139 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Desi2-202ENSMUST00000069568 1193 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm44228-201ENSMUST00000204888 2026 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm14975-201ENSMUST00000118741 664 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm13552-201ENSMUST00000118837 417 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm11991-201ENSMUST00000119652 1074 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm14202-201ENSMUST00000120121 311 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm24960-201ENSMUST00000157923 90 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm22636-201ENSMUST00000158142 275 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm22262-201ENSMUST00000158713 86 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm18358-201ENSMUST00000173179 1277 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm21182-201ENSMUST00000178899 794 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm8167-201ENSMUST00000183320 958 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Gm5511-201ENSMUST00000189380 802 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.65□□□□□ -1.34
Pcdh1F7BJK1 Trbv28-201ENSMUST00000192804 264 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 94.5 ms