Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col6a3E9PWQ3 Gm35172-201ENSMUST00000196037 2649 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Ppip5k1-203ENSMUST00000110626 5171 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm23513-201ENSMUST00000158181 133 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Olfr1426-206ENSMUST00000219996 2436 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm25292-201ENSMUST00000122797 322 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm8896-201ENSMUST00000197434 1106 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm25587-201ENSMUST00000082498 166 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Col6a3E9PWQ3 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm35648-201ENSMUST00000202304 475 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Gm28392-201ENSMUST00000077630 393 ntBASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Egflam-201ENSMUST00000058593 4778 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Col6a3E9PWQ3 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms