Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm37295-201ENSMUST00000192186 109 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm19195-201ENSMUST00000222018 511 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm8107-201ENSMUST00000117477 2009 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm9167-201ENSMUST00000182469 962 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm27299-201ENSMUST00000184593 103 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm18995-201ENSMUST00000202981 520 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm45734-201ENSMUST00000211916 411 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a4A2AX52 Gm37150-201ENSMUST00000193900 2754 ntBASIC5.79□□□□□ -1.48
Col6a4A2AX52 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 AC105958.1-201ENSMUST00000214783 2144 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm37785-201ENSMUST00000195783 2408 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm16204-201ENSMUST00000117864 1897 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm13772-201ENSMUST00000118431 317 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm12608-201ENSMUST00000122013 1715 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Mir1960-201ENSMUST00000157488 78 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm25433-201ENSMUST00000158283 286 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm11107-201ENSMUST00000165414 505 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Mir5112-201ENSMUST00000174897 60 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm38237-201ENSMUST00000193366 376 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm42443-201ENSMUST00000198084 1155 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm42723-201ENSMUST00000199966 1044 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm43725-201ENSMUST00000200122 369 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm43850-201ENSMUST00000202021 578 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm44561-201ENSMUST00000208869 264 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm45448-201ENSMUST00000211739 209 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Gm43534-201ENSMUST00000197685 2853 ntBASIC5.78□□□□□ -1.48
Col6a4A2AX52 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a4A2AX52 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Gm2709-201ENSMUST00000142979 350 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Snora47-201ENSMUST00000157483 138 ntBASIC5.77□□□□□ -1.49
Col6a4A2AX52 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Col6a4A2AX52 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms