Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.58□□□□□ -1.2
Scn3aA2ASI5 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Scn3aA2ASI5 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Scn3aA2ASI5 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Scn3aA2ASI5 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Scn3aA2ASI5 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Scn3aA2ASI5 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm43728-201ENSMUST00000198817 2622 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm5319-201ENSMUST00000118965 873 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm12630-201ENSMUST00000121575 784 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm13669-201ENSMUST00000122366 457 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm18006-201ENSMUST00000177411 662 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm18700-201ENSMUST00000185791 553 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm29357-201ENSMUST00000186877 698 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm36448-201ENSMUST00000199916 438 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 AC137902.1-201ENSMUST00000228184 102 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm10205-201ENSMUST00000087431 234 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm3555-201ENSMUST00000160287 1395 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 AC140393.3-201ENSMUST00000228396 1352 ntBASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Scn3aA2ASI5 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm22374-201ENSMUST00000104583 132 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm9064-201ENSMUST00000163579 566 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm5514-201ENSMUST00000060477 306 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Olfr687-201ENSMUST00000098154 938 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm11256-201ENSMUST00000118109 829 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm22552-201ENSMUST00000157796 337 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm3841-201ENSMUST00000191399 451 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm37135-201ENSMUST00000192652 534 ntBASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Scn3aA2ASI5 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms