Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm29588-201ENSMUST00000185738 298 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm7341-201ENSMUST00000192183 926 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm42580-201ENSMUST00000197223 753 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm44121-201ENSMUST00000205169 2006 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm5418-201ENSMUST00000206932 528 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm44849-201ENSMUST00000207595 484 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm9472-201ENSMUST00000221625 526 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm36758-201ENSMUST00000222594 310 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm22504-201ENSMUST00000082963 139 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
H2afb3S4R1G7 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 AU020206-202ENSMUST00000206358 3009 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm6490-201ENSMUST00000111862 461 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm12219-201ENSMUST00000119198 443 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm11257-201ENSMUST00000121313 315 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm14990-201ENSMUST00000122354 445 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm16026-205ENSMUST00000162923 641 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm5181-201ENSMUST00000183140 971 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Mir6930-201ENSMUST00000183859 68 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm28011-201ENSMUST00000184097 175 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm5147-201ENSMUST00000185999 794 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm6610-201ENSMUST00000186324 358 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm28142-201ENSMUST00000186899 698 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm8581-201ENSMUST00000188636 890 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Gm45078-201ENSMUST00000205343 546 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Tmem156-206ENSMUST00000212640 1271 ntTSL 5 BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
H2afb3S4R1G7 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.28□□□□□ -1.4
H2afb3S4R1G7 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms