Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm42782-201ENSMUST00000197286 522 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm5446-201ENSMUST00000091762 784 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.21□□□□□ -1.26
Rpa3Q9CQ71 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm7599-201ENSMUST00000121453 796 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm25722-201ENSMUST00000157498 279 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm26025-201ENSMUST00000158655 271 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm24680-201ENSMUST00000158759 126 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm9114-201ENSMUST00000188558 997 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm21301-201ENSMUST00000189476 699 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Trbv9-201ENSMUST00000194494 290 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm9710-201ENSMUST00000198053 499 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm42883-201ENSMUST00000202594 222 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm17950-201ENSMUST00000214617 646 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gm45528-201ENSMUST00000209854 3145 ntBASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Rpa3Q9CQ71 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm12242-201ENSMUST00000118824 738 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm9672-201ENSMUST00000166437 425 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm25574-201ENSMUST00000175245 249 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm21392-201ENSMUST00000182950 972 ntBASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.19□□□□□ -1.26
Rpa3Q9CQ71 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms