Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm25848-201ENSMUST00000116790 144 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Mup-ps22-201ENSMUST00000121611 243 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm22262-201ENSMUST00000158713 86 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Mir6239-201ENSMUST00000183564 105 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Mir8095-201ENSMUST00000185103 129 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm37376-201ENSMUST00000192176 453 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm38063-201ENSMUST00000193990 342 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm4860-201ENSMUST00000200368 454 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm7542-201ENSMUST00000201140 777 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 AC139845.2-201ENSMUST00000227504 436 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 AC154323.1-201ENSMUST00000228329 1231 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr890-201ENSMUST00000079804 945 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Trim11Q99PQ2 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm5752-201ENSMUST00000117771 594 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm15576-201ENSMUST00000117806 583 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm14898-201ENSMUST00000120202 645 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm22670-201ENSMUST00000158724 143 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm15256-201ENSMUST00000177793 883 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm28239-201ENSMUST00000190225 447 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm43765-201ENSMUST00000196303 893 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm21048-201ENSMUST00000202470 1166 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm7869-201ENSMUST00000121457 1322 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 AC164297.4-201ENSMUST00000224225 1307 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim11Q99PQ2 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms