Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm5139-201ENSMUST00000175943 249 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm44823-201ENSMUST00000204775 1107 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm9292-201ENSMUST00000222008 710 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm22272-201ENSMUST00000104039 134 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AV026068-231ENSMUST00000225862 482 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Cdh23Q99PF4 Gm9923-201ENSMUST00000217785 1836 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Gm25682-201ENSMUST00000083942 164 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Gm43292-201ENSMUST00000199580 2449 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Dpp4-201ENSMUST00000047812 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Cdh23Q99PF4 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm13887-201ENSMUST00000119009 344 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm46364-201ENSMUST00000218548 319 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm9088-201ENSMUST00000220237 508 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm37739-201ENSMUST00000191742 1505 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20691-201ENSMUST00000176889 333 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20932-201ENSMUST00000189115 694 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm19035-202ENSMUST00000194575 959 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Mir219c-201ENSMUST00000199860 60 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 Gm33601-201ENSMUST00000210001 961 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.66□□□□□ -1.34
Cdh23Q99PF4 AC164315.1-201ENSMUST00000226452 708 ntBASIC6.66□□□□□ -1.34
Cdh23Q99PF4 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms