Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Gm43775-201ENSMUST00000201019 3395 ntBASIC6.76□□□□□ -1.33
Msh4Q99MT2 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC6.76□□□□□ -1.33
Msh4Q99MT2 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.76□□□□□ -1.33
Msh4Q99MT2 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Msh4Q99MT2 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm24869-201ENSMUST00000104072 128 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm7599-201ENSMUST00000121453 796 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm24057-201ENSMUST00000158616 302 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 n-R5s93-201ENSMUST00000180091 119 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm18985-201ENSMUST00000196472 1079 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm5154-201ENSMUST00000203971 399 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm6681-201ENSMUST00000205215 607 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm35024-201ENSMUST00000213359 972 ntTSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm19186-201ENSMUST00000219922 333 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm46424-201ENSMUST00000221567 168 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm2840-201ENSMUST00000048361 411 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Msh4Q99MT2 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.75□□□□□ -1.33
Msh4Q99MT2 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.75□□□□□ -1.33
Msh4Q99MT2 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.74□□□□□ -1.33
Msh4Q99MT2 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Msh4Q99MT2 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms