Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm8275-201ENSMUST00000219732 424 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm21321-201ENSMUST00000220179 446 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm11360-201ENSMUST00000221898 262 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 AC107452.2-201ENSMUST00000228415 363 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm5564-201ENSMUST00000034916 967 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm26645-201ENSMUST00000181076 1316 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Gm45297-201ENSMUST00000209893 3483 ntBASIC8.21□□□□□ -1.09
Ccdc9Q8VC31 Gm42992-201ENSMUST00000197043 6836 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mir711-201ENSMUST00000102188 82 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm12445-201ENSMUST00000117947 885 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm13229-201ENSMUST00000118238 340 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm11688-201ENSMUST00000122145 308 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Scarna17-201ENSMUST00000158064 79 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mir6415-201ENSMUST00000184064 100 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm29126-201ENSMUST00000188686 151 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc9Q8VC31 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm45251-201ENSMUST00000209486 1465 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm25631-201ENSMUST00000104390 130 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm15715-201ENSMUST00000118032 283 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm13325-201ENSMUST00000118746 806 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm14414-201ENSMUST00000120833 573 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm5931-201ENSMUST00000121308 477 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm11761-201ENSMUST00000121392 445 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm11203-201ENSMUST00000122169 741 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm22275-201ENSMUST00000122470 310 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm22424-201ENSMUST00000158527 87 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm6100-201ENSMUST00000180253 403 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm29650-201ENSMUST00000188485 742 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm37375-201ENSMUST00000193859 387 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm17965-201ENSMUST00000193904 517 ntBASIC8.2□□□□□ -1.1
Ccdc9Q8VC31 Gm35108-201ENSMUST00000194321 699 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms