Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.13□□□□□ -1.43
Ebf4Q8K4J2 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm12094-201ENSMUST00000121781 472 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Mir8095-201ENSMUST00000185103 129 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm42558-201ENSMUST00000200982 265 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm45070-201ENSMUST00000208100 246 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm7151-201ENSMUST00000211511 954 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm5341-201ENSMUST00000058881 489 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Ebf4Q8K4J2 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Defa-ps7-201ENSMUST00000117139 168 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm5387-201ENSMUST00000119776 857 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm24286-201ENSMUST00000157632 128 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm23222-201ENSMUST00000158117 76 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm24883-201ENSMUST00000158391 281 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm24576-201ENSMUST00000175508 248 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Mir3072-201ENSMUST00000175610 83 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Gm19815-201ENSMUST00000175818 335 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.11□□□□□ -1.43
Ebf4Q8K4J2 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms