Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Nup88Q8CEC0 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm22781-201ENSMUST00000104083 137 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm26416-201ENSMUST00000104280 134 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm25498-201ENSMUST00000104424 129 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm13732-201ENSMUST00000117753 535 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm26183-201ENSMUST00000157685 139 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm16026-205ENSMUST00000162923 641 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm3760-201ENSMUST00000167475 804 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm37383-201ENSMUST00000191750 745 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm44227-201ENSMUST00000203576 241 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm8168-201ENSMUST00000209631 948 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Nup88Q8CEC0 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm25877-201ENSMUST00000104326 129 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm11889-201ENSMUST00000118402 1079 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm6987-201ENSMUST00000119319 428 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm4911-201ENSMUST00000119388 945 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm24155-201ENSMUST00000175259 110 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Mir7033-201ENSMUST00000184259 81 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm28801-201ENSMUST00000188761 449 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm42580-201ENSMUST00000197223 753 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Gm43084-201ENSMUST00000200696 947 ntBASIC8.06□□□□□ -1.12
Nup88Q8CEC0 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 116.5 ms