Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC124516.2-201ENSMUST00000221455 1829 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm24335-201ENSMUST00000104211 132 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm26012-201ENSMUST00000104411 128 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm15021-201ENSMUST00000117832 742 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm24236-201ENSMUST00000157794 134 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm16585-201ENSMUST00000161442 610 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm3275-201ENSMUST00000169145 487 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm38221-201ENSMUST00000195146 365 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm33626-201ENSMUST00000206790 828 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm6989-201ENSMUST00000218409 654 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC166263.1-201ENSMUST00000218586 238 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC164424.1-201ENSMUST00000221690 170 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 AC133283.1-201ENSMUST00000228443 859 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Snora74a-201ENSMUST00000083715 196 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdhb7Q8CDY9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm6284-201ENSMUST00000209609 4287 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm11865-201ENSMUST00000118093 859 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm6142-201ENSMUST00000120290 325 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm16276-201ENSMUST00000131218 262 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm23025-201ENSMUST00000158769 111 ntBASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC8.1□□□□□ -1.11
Pcdhb7Q8CDY9 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms