Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Lrif1Q8CDD9 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm25916-201ENSMUST00000104263 131 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm26016-201ENSMUST00000104403 129 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm13414-201ENSMUST00000117516 727 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm14631-201ENSMUST00000119067 594 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm8421-201ENSMUST00000119439 305 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm7244-201ENSMUST00000164658 455 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm20549-201ENSMUST00000174804 429 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm44147-201ENSMUST00000204658 94 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm20136-201ENSMUST00000207501 891 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm34424-201ENSMUST00000213400 782 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm6581-201ENSMUST00000214545 260 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 AV026068-219ENSMUST00000224148 933 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm6887-201ENSMUST00000080945 482 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Snora21-201ENSMUST00000082967 137 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Lrif1Q8CDD9 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm11318-201ENSMUST00000118640 961 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm8916-201ENSMUST00000119732 949 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm11371-201ENSMUST00000120294 385 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm24442-201ENSMUST00000157238 327 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm21728-201ENSMUST00000188442 695 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm21889-201ENSMUST00000188487 695 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20932-201ENSMUST00000189115 694 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm21920-201ENSMUST00000190042 695 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm7341-201ENSMUST00000192183 926 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Lrif1Q8CDD9 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms