Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Gm38381-201ENSMUST00000193594 2275 ntBASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Vps53Q8CCB4 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm12944-201ENSMUST00000119262 463 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm14251-201ENSMUST00000122133 279 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Mir1900-201ENSMUST00000122714 78 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm4613-201ENSMUST00000165488 276 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm7426-201ENSMUST00000179046 404 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Mir6241-201ENSMUST00000184225 103 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Mir6989-201ENSMUST00000184812 65 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm5244-202ENSMUST00000189517 743 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm29605-201ENSMUST00000190800 292 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm38022-201ENSMUST00000191762 403 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm8101-201ENSMUST00000192796 478 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm44943-201ENSMUST00000207254 300 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm45072-201ENSMUST00000208673 929 ntBASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
Vps53Q8CCB4 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Amy2b-201ENSMUST00000120184 1577 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm649-201ENSMUST00000117284 1054 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm12939-201ENSMUST00000117303 165 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm14863-201ENSMUST00000119648 307 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm24057-201ENSMUST00000158616 302 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm3208-201ENSMUST00000168281 427 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm28929-201ENSMUST00000185330 1193 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm5261-201ENSMUST00000185860 713 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm29156-201ENSMUST00000187764 499 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 AC155709.1-201ENSMUST00000218794 162 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Vmn1r41-202ENSMUST00000226337 888 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 CT030238.3-201ENSMUST00000227352 875 ntBASIC8.1□□□□□ -1.11
Vps53Q8CCB4 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Vps53Q8CCB4 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms