Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm8534-201ENSMUST00000118553 766 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm13222-201ENSMUST00000119638 138 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm5166-201ENSMUST00000121332 573 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm24781-201ENSMUST00000157636 117 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Mir7033-201ENSMUST00000184259 81 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm42464-202ENSMUST00000198111 774 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm6681-201ENSMUST00000205215 607 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm31711-201ENSMUST00000220687 196 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 AC122327.2-201ENSMUST00000220883 120 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 AC122327.3-201ENSMUST00000221852 120 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 AC166341.1-201ENSMUST00000223360 105 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 AC138329.1-201ENSMUST00000225040 471 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 AC131747.2-201ENSMUST00000226121 1895 ntBASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Atg4aQ8C9S8 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm25593-201ENSMUST00000102272 96 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Snord88a-201ENSMUST00000116723 90 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm13265-201ENSMUST00000118090 421 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm14870-201ENSMUST00000118414 156 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm25281-201ENSMUST00000157270 104 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm29197-201ENSMUST00000185922 702 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm23054-201ENSMUST00000082804 162 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Gm9226-201ENSMUST00000188352 3489 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 AC174797.5-201ENSMUST00000225055 1860 ntBASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Atg4aQ8C9S8 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Atg4aQ8C9S8 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms