Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Thbs1-201ENSMUST00000039559 5848 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm37647-201ENSMUST00000194556 3143 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm7058-201ENSMUST00000119209 902 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm11481-201ENSMUST00000120069 255 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm23250-201ENSMUST00000157444 267 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm24179-201ENSMUST00000158925 127 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm23810-201ENSMUST00000175150 74 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm17766-201ENSMUST00000209223 442 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.96□□□□□ -1.46
Rif1Q6PR54 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Rian-202ENSMUST00000181253 2355 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Rif1Q6PR54 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm14787-201ENSMUST00000121236 388 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm8190-201ENSMUST00000199603 586 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm42760-201ENSMUST00000199814 311 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm18007-201ENSMUST00000205019 844 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 AC154627.1-201ENSMUST00000228799 1286 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm42886-201ENSMUST00000199214 466 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.95□□□□□ -1.46
Rif1Q6PR54 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
Rif1Q6PR54 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Rif1Q6PR54 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Rif1Q6PR54 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Rif1Q6PR54 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Rif1Q6PR54 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Rif1Q6PR54 Gm43917-201ENSMUST00000191984 2360 ntBASIC5.94□□□□□ -1.46
Rif1Q6PR54 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms